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beetles plants verges
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Carabid beetles and vascular plants in Dutch roadside verges |
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biplot(<symcoca>) biplot(<predcoca>)
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Biplots of co-correspondence analysis models |
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bryophyte vascular
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Bryophytes and vascular plants in Carpathian spring meadows |
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coca()
|
Fit Co-Correspondence Analysis Ordination Models |
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predcoca.eigen() predcoca.simpls() symcoca()
|
Internal cocorresp Functions |
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cocorresp-package
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Co-correspondence analysis ordination methods for community ecology |
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coinertia()
|
Co-inertia analysis |
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coinertiaI()
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Coinertia analysis with identity matrices |
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corAxis()
|
Correlation between ordination axes |
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crossval() summary(<crossval>)
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Cross-validation for predictive Co-Correspondence
Analysis models |
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envfit(<coca>)
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Fit an environmental vector or factor to a Co-CA ordination |
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fitCoinertia() summary(<fitCoinertia>)
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Co-inertia analysis |
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fitted(<symcoca>)
|
Fitted values of a Symmetric Co-Correpsondence analysis model. |
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loadings()
|
CoCA species loadings |
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mcChi()
|
Standardised chi-square residuals |
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permutest(<coca>) summary(<permutest.coca>)
|
Permutation test for predictive co-correspondence analysis
models |
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plot(<predcoca>)
|
Biplots for predictive co-correspondence analysis |
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plot(<symcoca>)
|
Plots for symmetric co-correspondence analysis |
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points(<coca>)
|
Add points to a Co-CA plot |
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rescale()
|
Rescales CoCA species scores |
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resid(<symcoca>)
|
Extract Model Residuals |
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scaleChi()
|
Standardised chi-square residuals |
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scores(<predcoca>) scores(<symcoca>)
|
Get Species or Site Scores from an Ordination |
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screeplot(<symcoca>)
|
Screeplot for symmetric co-correspondence analysis |
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simpls()
|
Modified version of Sijmen de Jong's SIMPLS |
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summary(<predcoca>) summary(<symcoca>)
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Summarizing Co-CA Model Fits |
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weights(<symcoca>) weights(<predcoca>)
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Exctract CoCA model weights |