Plot estimated effects for model parametric terms
Source:R/parametric-effects.R
draw.parametric_effects.RdPlot estimated effects for model parametric terms
Arguments
- object
a fitted GAM, the result of a call to
mgcv::gam().- scales
character; should all univariate smooths be plotted with the same y-axis scale? If
scales = "free", the default, each univariate smooth has its own y-axis scale. Ifscales = "fixed", a common y axis scale is used for all univariate smooths.Currently does not affect the y-axis scale of plots of the parametric terms.
- ci_level
numeric between 0 and 1; the coverage of credible interval.
- ci_col
colour specification for the confidence/credible intervals band. Affects the fill of the interval.
- ci_alpha
numeric; alpha transparency for confidence or simultaneous interval.
- line_col
colour specification used for regression lines of linear continuous terms.
- constant
numeric; a constant to add to the estimated values of the smooth.
constant, if supplied, will be added to the estimated value before the confidence band is computed.- fun
function; a function that will be applied to the estimated values and confidence interval before plotting. Can be a function or the name of a function. Function
funwill be applied after adding anyconstant, if provided.- rug
logical; draw a rug plot at the bottom of each plot for 1-D smooths or plot locations of data for higher dimensions.
- position
Position adjustment, either as a string, or the result of a call to a position adjustment function.
- angle
numeric; the angle at which the x axis tick labels are to be drawn passed to the
angleargument ofggplot2::guide_axis().- ...
additional arguments passed to
patchwork::wrap_plots().- ncol, nrow
numeric; the numbers of rows and columns over which to spread the plots
- guides
character; one of
"keep"(the default),"collect", or"auto". Passed topatchwork::plot_layout()