Plot estimated effects for model parametric terms
Source:R/parametric-effects.R
draw.parametric_effects.Rd
Plot estimated effects for model parametric terms
Arguments
- object
a fitted GAM, the result of a call to
mgcv::gam()
.- scales
character; should all univariate smooths be plotted with the same y-axis scale? If
scales = "free"
, the default, each univariate smooth has its own y-axis scale. Ifscales = "fixed"
, a common y axis scale is used for all univariate smooths.Currently does not affect the y-axis scale of plots of the parametric terms.
- ci_level
numeric between 0 and 1; the coverage of credible interval.
- ci_col
colour specification for the confidence/credible intervals band. Affects the fill of the interval.
- ci_alpha
numeric; alpha transparency for confidence or simultaneous interval.
- line_col
colour specification used for regression lines of linear continuous terms.
- constant
numeric; a constant to add to the estimated values of the smooth.
constant
, if supplied, will be added to the estimated value before the confidence band is computed.- fun
function; a function that will be applied to the estimated values and confidence interval before plotting. Can be a function or the name of a function. Function
fun
will be applied after adding anyconstant
, if provided.- rug
logical; draw a rug plot at the bottom of each plot for 1-D smooths or plot locations of data for higher dimensions.
- position
Position adjustment, either as a string, or the result of a call to a position adjustment function.
- angle
numeric; the angle at which the x axis tick labels are to be drawn passed to the
angle
argument ofggplot2::guide_axis()
.- ...
additional arguments passed to
patchwork::wrap_plots()
.- ncol, nrow
numeric; the numbers of rows and columns over which to spread the plots
- guides
character; one of
"keep"
(the default),"collect"
, or"auto"
. Passed topatchwork::plot_layout()