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Fortify analysis of similarities (ANOSIM) results

Source: R/fortify.anosim.R
fortify.anosim.Rd

Prepares a fortified version of results from vegan::anosim() objects.

Usage

# S3 method for class 'anosim'
fortify(model, data, ...)

# S3 method for class 'anosim'
tidy(x, data, ...)

Arguments

model, x

an object of class vegan::anosim().

data

original data set. Currently ignored.

...

additional arguments for other methods. Currently ignored.

Value

A data frame with columns Rank and Class with ranks of dissimilarity.

Author

Original implementation by Didzis Elferts. Modification to tibbles by Gavin L. Simpson.

Examples


library("vegan")

library("ggplot2")
data(dune, dune.env)
dune.dist <- vegdist(dune)
dune.ano <- with(dune.env, anosim(dune.dist, Management))

df <- fortify(dune.ano)

ggplot(df, aes(x = class, y = rank)) +
    geom_boxplot(notch = FALSE, varwidth = TRUE)